App UI not to stay on top

What’s the best way to make an app not stay on top?

We’re running into an issue with the Loader app that when loading a geo in Nuke, there is another pop up window that shows up to select some option but since the Loader app is set to stay on top, we can’t access the geo pop up UI. Then we can’t close the Loader app and we can’t get to the geo pop up ui, so then we have to kill Nuke.

I tried to set the app to show_diloag and also tried disabling the window flag

self.setWindowFlags(self.windowFlags() & ~QtCore.Qt.WindowStaysOnTopHint)

Neither of these are working.

Any suggestions?

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